STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCCL_1938Phosphotransferase system trehalose-specific enzyme IIBC component homolog. (501 aa)    
Predicted Functional Partners:
MCCL_1071
Glucose-specific PTS system IIA component homolog.
 0.999
MCCL_1191
Conserved hypothetical protein; Similar to functionally unknown protein.
  
 
 0.982
glcB
Glucose-specific PTS system IIABC component.
 
 0.979
MCCL_0278
Sugar-specific permease EIIA 1 domain.
 
 0.978
MCCL_1937
Alpha-glucosidase homolog.
 
 
 0.978
MCCL_0979
Hypothetical protein.
  
  
 0.953
ptsH
Phosphocarrier protein HPr.
  
 
 0.945
MCCL_1936
GntR family regulatory protein homolog.
 
  
 0.911
MCCL_0373
Sucrose-6-phosphate hydrolase homolog; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
 
  
 0.894
MCCL_1015
Conserved hypothetical protein; Similar to transcription antiterminator.
 
 
 0.884
Your Current Organism:
Macrococcus caseolyticus
NCBI taxonomy Id: 458233
Other names: M. caseolyticus JCSC5402, Macrococcus caseolyticus JCSC5402, Macrococcus caseolyticus str. JCSC5402, Macrococcus caseolyticus strain JCSC5402
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.