Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
argB | argD | SAMEA3545228_01215 | SAMEA3545228_01455 | Acetylglutamate kinase. | Acetylornithine aminotransferase. | 0.971 |
argB | argF | SAMEA3545228_01215 | SAMEA3545228_00068 | Acetylglutamate kinase. | Ornithine carbamoyltransferase. | 0.967 |
argB | argG | SAMEA3545228_01215 | SAMEA3545228_01262 | Acetylglutamate kinase. | Argininosuccinate synthase. | 0.899 |
argB | argH | SAMEA3545228_01215 | SAMEA3545228_00627 | Acetylglutamate kinase. | Argininosuccinate lyase. | 0.959 |
argB | argJ_1 | SAMEA3545228_01215 | SAMEA3545228_01216 | Acetylglutamate kinase. | Arginine biosynthesis bifunctional protein ArgJ. | 0.997 |
argB | argJ_2 | SAMEA3545228_01215 | SAMEA3545228_02027 | Acetylglutamate kinase. | Arginine biosynthesis bifunctional protein ArgJ. | 0.991 |
argB | carA | SAMEA3545228_01215 | SAMEA3545228_00638 | Acetylglutamate kinase. | Carbamoyl-phosphate synthase small chain. | 0.633 |
argB | carB | SAMEA3545228_01215 | SAMEA3545228_00639 | Acetylglutamate kinase. | Carbamoyl-phosphate synthase large chain. | 0.728 |
argD | argB | SAMEA3545228_01455 | SAMEA3545228_01215 | Acetylornithine aminotransferase. | Acetylglutamate kinase. | 0.971 |
argD | argF | SAMEA3545228_01455 | SAMEA3545228_00068 | Acetylornithine aminotransferase. | Ornithine carbamoyltransferase. | 0.957 |
argD | argG | SAMEA3545228_01455 | SAMEA3545228_01262 | Acetylornithine aminotransferase. | Argininosuccinate synthase. | 0.879 |
argD | argH | SAMEA3545228_01455 | SAMEA3545228_00627 | Acetylornithine aminotransferase. | Argininosuccinate lyase. | 0.901 |
argD | argJ_1 | SAMEA3545228_01455 | SAMEA3545228_01216 | Acetylornithine aminotransferase. | Arginine biosynthesis bifunctional protein ArgJ. | 0.956 |
argD | argJ_2 | SAMEA3545228_01455 | SAMEA3545228_02027 | Acetylornithine aminotransferase. | Arginine biosynthesis bifunctional protein ArgJ. | 0.955 |
argD | carA | SAMEA3545228_01455 | SAMEA3545228_00638 | Acetylornithine aminotransferase. | Carbamoyl-phosphate synthase small chain. | 0.515 |
argD | carB | SAMEA3545228_01455 | SAMEA3545228_00639 | Acetylornithine aminotransferase. | Carbamoyl-phosphate synthase large chain. | 0.636 |
argD | pyrB | SAMEA3545228_01455 | SAMEA3545228_00069 | Acetylornithine aminotransferase. | Aspartate carbamoyltransferase. | 0.477 |
argF | argB | SAMEA3545228_00068 | SAMEA3545228_01215 | Ornithine carbamoyltransferase. | Acetylglutamate kinase. | 0.967 |
argF | argD | SAMEA3545228_00068 | SAMEA3545228_01455 | Ornithine carbamoyltransferase. | Acetylornithine aminotransferase. | 0.957 |
argF | argG | SAMEA3545228_00068 | SAMEA3545228_01262 | Ornithine carbamoyltransferase. | Argininosuccinate synthase. | 0.992 |
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