STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCG97428.1Thiamine monophosphate kinase. (314 aa)    
Predicted Functional Partners:
purL
Phosphoribosylformylglycinamidine synthase.
     
 0.829
SCG97484.1
Uncharacterised protein.
       0.757
thiE
Thiamine-phosphate synthase.
    
  0.740
SCH16443.1
Replication initiation/membrane attachment protein.
  
     0.604
SCH28166.1
DNA-directed RNA polymerase subunit omega.
 
     0.590
SCH47743.1
Uncharacterised protein.
  
     0.588
SCG97378.1
Uncharacterised protein.
       0.581
SCH40156.1
Putative membrane fusion protein.
  
     0.543
tenI
Regulatory protein tenI.
    
  0.533
SCG97313.1
Divergent AAA domain.
       0.520
Your Current Organism:
uncultured Coprococcus sp.
NCBI taxonomy Id: 458253
Other names: u. Coprococcus sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.