Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCG95219.1 | SCH01888.1 | SAMEA3545228_00058 | SAMEA3545228_00182 | Uncharacterized protein conserved in archaea. | Uncharacterized conserved protein%2C contains FHA domain. | 0.931 |
SCG95219.1 | SCH09265.1 | SAMEA3545228_00058 | SAMEA3545228_00329 | Uncharacterized protein conserved in archaea. | Tol-pal system protein YbgF. | 0.962 |
SCG95219.1 | cph2_1 | SAMEA3545228_00058 | SAMEA3545228_01410 | Uncharacterized protein conserved in archaea. | Bacteriophytochrome cph2. | 0.999 |
SCG95219.1 | gmr_1 | SAMEA3545228_00058 | SAMEA3545228_00906 | Uncharacterized protein conserved in archaea. | Cyclic di-GMP phosphodiesterase Gmr. | 0.992 |
SCG95219.1 | luxQ_1 | SAMEA3545228_00058 | SAMEA3545228_00051 | Uncharacterized protein conserved in archaea. | Autoinducer 2 sensor kinase/phosphatase luxQ. | 0.999 |
SCG95219.1 | prkC_1 | SAMEA3545228_00058 | SAMEA3545228_00179 | Uncharacterized protein conserved in archaea. | Serine/threonine-protein kinase PrkC. | 0.805 |
SCG95219.1 | pyk | SAMEA3545228_00058 | SAMEA3545228_00016 | Uncharacterized protein conserved in archaea. | Pyruvate kinase. | 0.931 |
SCG95219.1 | ribBA | SAMEA3545228_00058 | SAMEA3545228_01525 | Uncharacterized protein conserved in archaea. | Riboflavin biosynthesis protein ribBA. | 0.967 |
SCG95219.1 | rpfG_2 | SAMEA3545228_00058 | SAMEA3545228_00778 | Uncharacterized protein conserved in archaea. | Cyclic di-GMP phosphodiesterase response regulator RpfG. | 0.994 |
SCG95219.1 | yycG_1 | SAMEA3545228_00058 | SAMEA3545228_00093 | Uncharacterized protein conserved in archaea. | Sensor histidine kinase YycG. | 0.983 |
SCH01888.1 | SCG95219.1 | SAMEA3545228_00182 | SAMEA3545228_00058 | Uncharacterized conserved protein%2C contains FHA domain. | Uncharacterized protein conserved in archaea. | 0.931 |
SCH01888.1 | SCH09265.1 | SAMEA3545228_00182 | SAMEA3545228_00329 | Uncharacterized conserved protein%2C contains FHA domain. | Tol-pal system protein YbgF. | 0.798 |
SCH01888.1 | cph2_1 | SAMEA3545228_00182 | SAMEA3545228_01410 | Uncharacterized conserved protein%2C contains FHA domain. | Bacteriophytochrome cph2. | 0.903 |
SCH01888.1 | gmr_1 | SAMEA3545228_00182 | SAMEA3545228_00906 | Uncharacterized conserved protein%2C contains FHA domain. | Cyclic di-GMP phosphodiesterase Gmr. | 0.716 |
SCH01888.1 | luxQ_1 | SAMEA3545228_00182 | SAMEA3545228_00051 | Uncharacterized conserved protein%2C contains FHA domain. | Autoinducer 2 sensor kinase/phosphatase luxQ. | 0.853 |
SCH01888.1 | prkC_1 | SAMEA3545228_00182 | SAMEA3545228_00179 | Uncharacterized conserved protein%2C contains FHA domain. | Serine/threonine-protein kinase PrkC. | 0.774 |
SCH01888.1 | pyk | SAMEA3545228_00182 | SAMEA3545228_00016 | Uncharacterized conserved protein%2C contains FHA domain. | Pyruvate kinase. | 0.776 |
SCH01888.1 | ribBA | SAMEA3545228_00182 | SAMEA3545228_01525 | Uncharacterized conserved protein%2C contains FHA domain. | Riboflavin biosynthesis protein ribBA. | 0.764 |
SCH01888.1 | rpfG_2 | SAMEA3545228_00182 | SAMEA3545228_00778 | Uncharacterized conserved protein%2C contains FHA domain. | Cyclic di-GMP phosphodiesterase response regulator RpfG. | 0.749 |
SCH01888.1 | yycG_1 | SAMEA3545228_00182 | SAMEA3545228_00093 | Uncharacterized conserved protein%2C contains FHA domain. | Sensor histidine kinase YycG. | 0.732 |
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