STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCH03855.1Putative zinc finger/helix-turn-helix protein%2C YgiT family. (72 aa)    
Predicted Functional Partners:
SCH03960.1
Cd1.
  
    0.785
SCH03901.1
Uncharacterised protein.
       0.773
SCI14673.1
Uncharacterized protein conserved in bacteria.
   
 0.751
cobC
Alpha-ribazole phosphatase.
       0.658
SCH03805.1
Uncharacterised protein.
       0.549
SCH04059.1
Uncharacterised protein.
       0.496
Your Current Organism:
uncultured Coprococcus sp.
NCBI taxonomy Id: 458253
Other names: u. Coprococcus sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.