STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trpEAnthranilate synthase component 1. (495 aa)    
Predicted Functional Partners:
trpG
Anthranilate synthase component II.
 0.999
trpD
Anthranilate phosphoribosyltransferase.
 
 0.999
trpC
Indole-3-glycerol phosphate synthase.
 0.999
trpF
N-(5'-phosphoribosyl)anthranilate isomerase.
 
 
 0.976
trpA
Tryptophan synthase alpha chain.
 
  
 0.970
pheA
P-protein.
 
 
 0.968
trpB_1
Tryptophan synthase beta chain.
 
 
 0.961
aroC
Chorismate synthase.
 
 
 0.955
SCH47011.1
Chorismate mutase.
  
 
 0.908
ilvE
Branched-chain-amino-acid aminotransferase.
  
 
 0.847
Your Current Organism:
uncultured Coprococcus sp.
NCBI taxonomy Id: 458253
Other names: u. Coprococcus sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.