STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCH10531.1Uncharacterised protein. (195 aa)    
Predicted Functional Partners:
psd
Phosphatidylserine decarboxylase proenzyme.
    
 0.784
SCI11818.1
CDP-diacylglycerol-serine O-phosphatidyltransferase.
    
 0.761
nqo1
NADH-quinone oxidoreductase subunit 1.
   
 
 0.731
SCH60604.1
Farnesyl diphosphate synthase.
  
 
 0.673
metH_2
Methionine synthase.
    
 0.670
SCH85723.1
Mg-protoporphyrin IX methyl transferase.
  
 0.643
SCH91857.1
Trans-aconitate 2-methyltransferase.
  
 0.643
SCI08703.1
Uncharacterised protein.
  
 0.643
metK
S-adenosylmethionine synthase.
  
 
 0.624
ppsA
Plipastatin synthase subunit A.
    
 0.601
Your Current Organism:
uncultured Coprococcus sp.
NCBI taxonomy Id: 458253
Other names: u. Coprococcus sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.