STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCH16807.1Uncharacterised protein. (317 aa)    
Predicted Functional Partners:
SCH16843.1
ABC-type cobalt transport system%2C permease component CbiQ and related transporters.
 
     0.942
ykoD
Putative HMP/thiamine import ATP-binding protein YkoD.
 
     0.940
SCH16770.1
Fibronectin type III domain.
  
  0.926
SCH16945.1
Flagellin N-methylase.
       0.727
luxQ_2
Autoinducer 2 sensor kinase/phosphatase luxQ.
       0.567
regX3_1
Sensory transduction protein regX3.
       0.567
ybaK
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase ybaK.
       0.567
SCH68840.1
Spore germination protein.
    
  0.486
malQ
4-alpha-glucanotransferase.
    
  0.481
glcA
Glucan endo-1%2C3-beta-glucosidase A1 precursor.
    
  0.469
Your Current Organism:
uncultured Coprococcus sp.
NCBI taxonomy Id: 458253
Other names: u. Coprococcus sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.