STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
norM_1Na(+)/drug antiporter. (440 aa)    
Predicted Functional Partners:
melR_1
Melibiose operon regulatory protein.
 
     0.890
mepA_8
Multidrug export protein mepA.
 
    
0.695
mepA_7
Staphylococcal virulence regulator protein A.
  
     0.689
mepA_10
Multidrug export protein mepA.
  
     0.575
rnc
Ribonuclease 3.
   
 
  0.540
egsA
Glycerol-1-phosphate dehydrogenase [NAD(P)+].
  
     0.479
mepA_9
Staphylococcal virulence regulator protein A.
  
     0.474
mepA_6
Multidrug export protein mepA.
  
     0.466
SCH30357.1
Uncharacterized protein family UPF0016.
       0.453
yrbG
Inner membrane protein yrbG.
  
    0.438
Your Current Organism:
uncultured Coprococcus sp.
NCBI taxonomy Id: 458253
Other names: u. Coprococcus sp.
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