STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCH30816.1Putative acetyltransferase. (84 aa)    
Predicted Functional Partners:
hisF_1
Imidazole glycerol phosphate synthase subunit HisF.
  
 
  0.932
SCH30761.1
Predicted acetyltransferase involved in intracellular survival and related acetyltransferases.
    
  0.842
argG
Argininosuccinate synthase.
  
 
 0.787
SCH15434.1
Aspartate aminotransferase.
    
  0.723
argC
N-acetyl-gamma-glutamyl-phosphate reductase.
  
 
 0.710
argB
Acetylglutamate kinase.
  
 
 0.706
patA
Putrescine aminotransferase.
 
 
 0.697
argF
Ornithine carbamoyltransferase.
  
 
 0.692
SCH30706.1
Uncharacterised protein.
       0.675
pyrB
Aspartate carbamoyltransferase.
    
 0.605
Your Current Organism:
uncultured Coprococcus sp.
NCBI taxonomy Id: 458253
Other names: u. Coprococcus sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.