STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hisDHistidinol dehydrogenase. (429 aa)    
Predicted Functional Partners:
hisB
Imidazoleglycerol-phosphate dehydratase.
 
 0.999
hisF_1
Imidazole glycerol phosphate synthase subunit HisF.
 
 0.999
hisG
ATP phosphoribosyltransferase.
 
 
 0.998
hisF_2
Imidazole glycerol phosphate synthase subunit HisF.
 
 0.996
hisH1
Imidazole glycerol phosphate synthase subunit HisH 1.
 
 0.996
hisC
Histidinol-phosphate aminotransferase.
 
 0.989
hisZ
ATP phosphoribosyltransferase regulatory subunit.
 
 
 0.971
cobD_2
Threonine-phosphate decarboxylase.
 
 0.963
hisK
Histidinol-phosphatase.
 
 
 0.951
hisA
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m ethylideneamino] imidazole-4-carboxamide isomerase.
  
 
 0.946
Your Current Organism:
uncultured Coprococcus sp.
NCBI taxonomy Id: 458253
Other names: u. Coprococcus sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.