STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCH41404.1Uncharacterized protein conserved in bacteria. (229 aa)    
Predicted Functional Partners:
SCH41465.1
Radical SAM family uncharacterized protein.
    0.995
rng
Ribonuclease G.
 
     0.852
SCH41511.1
Uncharacterized conserved protein.
       0.714
SCH90821.1
Putative FeS-containing Cyanobacterial-specific oxidoreductase.
  
     0.610
SCH41571.1
ACT domain-containing protein.
       0.609
SCH41248.1
Predicted ribosomal protein.
  
    0.606
rpmA
50S ribosomal protein L27.
       0.593
rplU
50S ribosomal protein L21.
       0.593
obg
GTP-binding protein obg.
  
    0.482
SCH41666.1
Methylamine methyltransferase corrinoid protein reductive activase.
 
     0.449
Your Current Organism:
uncultured Coprococcus sp.
NCBI taxonomy Id: 458253
Other names: u. Coprococcus sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.