Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
era | rpsB | SAMEA3545228_00611 | SAMEA3545228_01575 | Bex protein. | Vegetative protein 209. | 0.999 |
era | rpsF | SAMEA3545228_00611 | SAMEA3545228_01308 | Bex protein. | 30S ribosomal protein S6. | 0.999 |
era | rpsI | SAMEA3545228_00611 | SAMEA3545228_01814 | Bex protein. | BS10. | 0.999 |
era | rpsK | SAMEA3545228_00611 | SAMEA3545228_01823 | Bex protein. | 30S ribosomal protein S11. | 0.999 |
era | rpsO | SAMEA3545228_00611 | SAMEA3545228_00685 | Bex protein. | BS18. | 0.999 |
era | rpsP | SAMEA3545228_00611 | SAMEA3545228_00883 | Bex protein. | BS17. | 0.999 |
rplS | rpmA | SAMEA3545228_00845 | SAMEA3545228_00784 | 50S ribosomal protein L19. | 50S ribosomal protein L27. | 0.998 |
rplS | rpsB | SAMEA3545228_00845 | SAMEA3545228_01575 | 50S ribosomal protein L19. | Vegetative protein 209. | 0.998 |
rplS | rpsD | SAMEA3545228_00845 | SAMEA3545228_01822 | 50S ribosomal protein L19. | 30S ribosomal protein S4. | 0.998 |
rplS | rpsF | SAMEA3545228_00845 | SAMEA3545228_01308 | 50S ribosomal protein L19. | 30S ribosomal protein S6. | 0.998 |
rplS | rpsI | SAMEA3545228_00845 | SAMEA3545228_01814 | 50S ribosomal protein L19. | BS10. | 0.998 |
rplS | rpsK | SAMEA3545228_00845 | SAMEA3545228_01823 | 50S ribosomal protein L19. | 30S ribosomal protein S11. | 0.998 |
rplS | rpsO | SAMEA3545228_00845 | SAMEA3545228_00685 | 50S ribosomal protein L19. | BS18. | 0.998 |
rplS | rpsP | SAMEA3545228_00845 | SAMEA3545228_00883 | 50S ribosomal protein L19. | BS17. | 0.999 |
rplS | rpsR | SAMEA3545228_00845 | SAMEA3545228_01306 | 50S ribosomal protein L19. | BS21. | 0.998 |
rpmA | rplS | SAMEA3545228_00784 | SAMEA3545228_00845 | 50S ribosomal protein L27. | 50S ribosomal protein L19. | 0.998 |
rpmA | rpsB | SAMEA3545228_00784 | SAMEA3545228_01575 | 50S ribosomal protein L27. | Vegetative protein 209. | 0.998 |
rpmA | rpsD | SAMEA3545228_00784 | SAMEA3545228_01822 | 50S ribosomal protein L27. | 30S ribosomal protein S4. | 0.998 |
rpmA | rpsF | SAMEA3545228_00784 | SAMEA3545228_01308 | 50S ribosomal protein L27. | 30S ribosomal protein S6. | 0.997 |
rpmA | rpsI | SAMEA3545228_00784 | SAMEA3545228_01814 | 50S ribosomal protein L27. | BS10. | 0.998 |
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