Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCG93657.1 | SCH13919.1 | SAMEA3545228_00027 | SAMEA3545228_00427 | Bacterial Ig-like domain (group 2). | Uncharacterised protein. | 0.457 |
SCG93657.1 | cgkA_4 | SAMEA3545228_00027 | SAMEA3545228_01051 | Bacterial Ig-like domain (group 2). | Kappa-carrageenase precursor. | 0.414 |
SCG93657.1 | cgkA_5 | SAMEA3545228_00027 | SAMEA3545228_01052 | Bacterial Ig-like domain (group 2). | Kappa-carrageenase precursor. | 0.424 |
SCH13919.1 | SCG93657.1 | SAMEA3545228_00427 | SAMEA3545228_00027 | Uncharacterised protein. | Bacterial Ig-like domain (group 2). | 0.457 |
SCH13919.1 | SCI41557.1 | SAMEA3545228_00427 | SAMEA3545228_02515 | Uncharacterised protein. | Uncharacterised protein. | 0.427 |
SCH13919.1 | cgkA_4 | SAMEA3545228_00427 | SAMEA3545228_01051 | Uncharacterised protein. | Kappa-carrageenase precursor. | 0.418 |
SCH13919.1 | cgkA_5 | SAMEA3545228_00427 | SAMEA3545228_01052 | Uncharacterised protein. | Kappa-carrageenase precursor. | 0.447 |
SCI41557.1 | SCH13919.1 | SAMEA3545228_02515 | SAMEA3545228_00427 | Uncharacterised protein. | Uncharacterised protein. | 0.427 |
SCI41557.1 | cgkA_4 | SAMEA3545228_02515 | SAMEA3545228_01051 | Uncharacterised protein. | Kappa-carrageenase precursor. | 0.414 |
cgkA_4 | SCG93657.1 | SAMEA3545228_01051 | SAMEA3545228_00027 | Kappa-carrageenase precursor. | Bacterial Ig-like domain (group 2). | 0.414 |
cgkA_4 | SCH13919.1 | SAMEA3545228_01051 | SAMEA3545228_00427 | Kappa-carrageenase precursor. | Uncharacterised protein. | 0.418 |
cgkA_4 | SCI41557.1 | SAMEA3545228_01051 | SAMEA3545228_02515 | Kappa-carrageenase precursor. | Uncharacterised protein. | 0.414 |
cgkA_4 | cgkA_5 | SAMEA3545228_01051 | SAMEA3545228_01052 | Kappa-carrageenase precursor. | Kappa-carrageenase precursor. | 0.678 |
cgkA_5 | SCG93657.1 | SAMEA3545228_01052 | SAMEA3545228_00027 | Kappa-carrageenase precursor. | Bacterial Ig-like domain (group 2). | 0.424 |
cgkA_5 | SCH13919.1 | SAMEA3545228_01052 | SAMEA3545228_00427 | Kappa-carrageenase precursor. | Uncharacterised protein. | 0.447 |
cgkA_5 | cgkA_4 | SAMEA3545228_01052 | SAMEA3545228_01051 | Kappa-carrageenase precursor. | Kappa-carrageenase precursor. | 0.678 |