STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCH64218.1Replication initiator protein A (RepA) N-terminus. (258 aa)    
Predicted Functional Partners:
SCH64175.1
Protein of uncharacterised function (DUF3801).
 
     0.934
SCH64136.1
Type IV secretory pathway%2C VirD4 components.
 
     0.931
SCH63737.1
Uncharacterised protein.
  
     0.771
SCH64008.1
Uncharacterised protein.
  
     0.766
SCH63488.1
Uncharacterised protein.
  
    0.765
SCH63922.1
Type IV secretory pathway%2C VirB4 components.
 
     0.757
SCI39442.1
Uncharacterised protein.
  
     0.755
SCH63595.1
DNA methylase.
  
    0.754
cwlS
D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase CwlS precursor.
 
     0.754
SCH63967.1
PrgI family protein.
  
     0.751
Your Current Organism:
uncultured Coprococcus sp.
NCBI taxonomy Id: 458253
Other names: u. Coprococcus sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.