STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
argGArgininosuccinate synthase. (408 aa)    
Predicted Functional Partners:
argH
Argininosuccinate lyase.
 
 
 0.998
carB
Carbamoyl-phosphate synthase large chain.
 
 
 0.995
argF
Ornithine carbamoyltransferase.
 
 
 0.992
carA
Carbamoyl-phosphate synthase small chain.
  
 
 0.960
thrA
Aspartokinase I/homoserine dehydrogenase I.
 
 
 0.944
purA
Adenylosuccinate synthetase.
   
 
 0.939
aspC
Aspartate aminotransferase.
   
 0.932
asnO
Asparagine synthetase [glutamine-hydrolyzing] 3.
   
 0.931
nadB
L-aspartate oxidase.
     
 0.925
pyrB
Aspartate carbamoyltransferase.
   
 
 0.918
Your Current Organism:
uncultured Coprococcus sp.
NCBI taxonomy Id: 458253
Other names: u. Coprococcus sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.