STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ssb_2Helix-destabilizing protein. (146 aa)    
Predicted Functional Partners:
rpsF
30S ribosomal protein S6.
  
  
 0.890
dnaE
DNA polymerase III subunit alpha.
  
 
 0.888
topA
DNA topoisomerase 1.
  
 
 0.875
rpsR
BS21.
 
 
 0.862
priA
Primosomal protein N'.
  
 
 0.842
dnaX_2
DNA polymerase III subunit tau.
  
 
 0.826
dnaX_1
DNA polymerase III subunit tau.
  
 
 0.813
rnhA
Ribonuclease H.
   
 
 0.665
dnaC_1
Replicative DNA helicase.
 
 0.631
rplJ
50S ribosomal protein L10.
  
    0.617
Your Current Organism:
uncultured Coprococcus sp.
NCBI taxonomy Id: 458253
Other names: u. Coprococcus sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.