STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pbpXPenicillin-binding protein 2x. (729 aa)    
Predicted Functional Partners:
ftsW_3
Cell division protein FtsW.
 0.968
SCH86511.1
Uncharacterised protein.
 
 0.954
ftsW_1
Cell division protein FtsW.
 0.949
rodA
Rod shape-determining protein RodA.
 0.946
ftsW_2
Cell division protein FtsW.
 0.921
penA
Penicillin-binding protein 2.
 
  
 
0.899
SCG94753.1
Protein interacting with poly(A)-binding protein.
  
 0.885
SCH01846.1
Uncharacterized conserved protein%2C contains FHA domain.
  
 0.885
murD
UDP-N-acetylmuramoylalanine--D-glutamate ligase.
 
  
 0.834
pbpA_2
Penicillin-binding protein A.
  
  
0.828
Your Current Organism:
uncultured Coprococcus sp.
NCBI taxonomy Id: 458253
Other names: u. Coprococcus sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.