STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCI08703.1Uncharacterised protein. (382 aa)    
Predicted Functional Partners:
SCI08666.1
OST-HTH/LOTUS domain.
       0.773
SCH10531.1
Uncharacterised protein.
  
 0.643
SCH71768.1
Uncharacterised protein.
    
 0.601
SCH81042.1
Mg-chelatase subunit ChlD.
    
 0.601
SCH33962.1
Uncharacterized radical SAM protein YgiQ.
  
 
 0.553
SCH30979.1
Haloalkane dehalogenase.
     
 0.507
glyA_1
Pyridoxal-phosphate-dependent serine hydroxymethyltransferase.
   
  0.480
glyA_2
Pyridoxal-phosphate-dependent serine hydroxymethyltransferase.
   
  0.480
fabG_1
3-oxoacyl-[acyl-carrier-protein] reductase FabG.
    
 0.479
ydaD
General stress protein 39.
    
 0.479
Your Current Organism:
uncultured Coprococcus sp.
NCBI taxonomy Id: 458253
Other names: u. Coprococcus sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.