STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCI09639.1Putative DMT superfamily transporter inner membrane protein. (311 aa)    
Predicted Functional Partners:
ttcA_2
tRNA 2-thiocytidine biosynthesis protein TtcA.
  
    0.659
uppS
Undecaprenyl pyrophosphate synthase.
   
 
  0.511
macB_6
Macrolide export ATP-binding/permease protein MacB.
  
    0.470
SCI09787.1
FtsX-like permease family.
  
    0.466
SCI09709.1
Uncharacterised protein.
       0.462
SCI09827.1
FtsX-like permease family.
       0.462
pheT
Phenylalanine--tRNA ligase beta subunit.
  
   0.406
SCH16843.1
ABC-type cobalt transport system%2C permease component CbiQ and related transporters.
  
 
  0.401
ecfT
Energy-coupling factor transporter transmembrane protein EcfT.
  
 
  0.401
Your Current Organism:
uncultured Coprococcus sp.
NCBI taxonomy Id: 458253
Other names: u. Coprococcus sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.