STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCI12600.1Probable type I restriction enzyme BthVORF4518P M protein. (468 aa)    
Predicted Functional Partners:
SCI12551.1
Uncharacterised protein.
     0.994
SCI12512.1
Type I restriction modification DNA specificity domain.
 
 0.991
hsdR_2
Type I restriction enzyme EcoR124II R protein.
 
 
 0.989
SCH14467.1
Type I restriction modification DNA specificity domain.
 
 0.962
SCH14555.1
Type I restriction modification DNA specificity domain.
 
 0.961
hsdR_1
Type I restriction enzyme EcoR124II R protein.
 
 
 0.951
SCH14596.1
Type I restriction modification DNA specificity domain.
 
 0.916
SCI12650.1
Predicted transcriptional regulator.
       0.779
SCI12423.1
Uncharacterised protein.
       0.746
SCI12229.1
Predicted ATPase.
 
  
 0.678
Your Current Organism:
uncultured Coprococcus sp.
NCBI taxonomy Id: 458253
Other names: u. Coprococcus sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.