STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fabG_23-oxoacyl-[acyl-carrier-protein] reductase FabG. (244 aa)    
Predicted Functional Partners:
fabD
Malonyl CoA-acyl carrier protein transacylase.
 0.982
fabH
3-oxoacyl-[acyl-carrier-protein] synthase 3.
 
 
 0.954
glcB
PTS system glucoside-specific EIICBA component.
     
 0.943
fabF_2
3-oxoacyl-[acyl-carrier-protein] synthase 2.
 
 0.939
fabF_1
3-oxoacyl-[acyl-carrier-protein] synthase 2.
 
 0.938
ppsA
Plipastatin synthase subunit A.
  
 0.920
accD
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta.
 
 
 0.911
SCH91674.1
Uncharacterised protein.
   
 0.870
rpiB
Ribose-5-phosphate isomerase B.
  
 0.865
SCH30864.1
Uncharacterised protein.
   
 0.857
Your Current Organism:
uncultured Coprococcus sp.
NCBI taxonomy Id: 458253
Other names: u. Coprococcus sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.