STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
argJ_2Arginine biosynthesis bifunctional protein ArgJ. (416 aa)    
Predicted Functional Partners:
argB
Acetylglutamate kinase.
 
 0.991
argC
N-acetyl-gamma-glutamyl-phosphate reductase.
 
 
 0.956
argD
Acetylornithine aminotransferase.
 
 
 0.955
argF
Ornithine carbamoyltransferase.
 
 
 0.953
patA
Putrescine aminotransferase.
 
 
 0.884
argH
Argininosuccinate lyase.
  
 
 0.818
argG
Argininosuccinate synthase.
  
  
 0.816
argR
Arginine hydroxamate resistance protein.
  
  
 0.768
aspC
Aspartate aminotransferase.
     
 0.755
SCH15434.1
Aspartate aminotransferase.
     
 0.753
Your Current Organism:
uncultured Coprococcus sp.
NCBI taxonomy Id: 458253
Other names: u. Coprococcus sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.