STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
argJ_2Arginine biosynthesis bifunctional protein ArgJ. (416 aa)    
Predicted Functional Partners:
argB
Acetylglutamate kinase.
 
 0.990
argC
N-acetyl-gamma-glutamyl-phosphate reductase.
 
 
 0.959
argD
Acetylornithine aminotransferase.
 
 
 0.943
argF
Ornithine carbamoyltransferase.
 
 
 0.940
patA
Putrescine aminotransferase.
 
 
 0.812
argR
Arginine hydroxamate resistance protein.
  
  
 0.794
argG
Argininosuccinate synthase.
  
  
 0.789
argH
Argininosuccinate lyase.
  
 
 0.740
SCH15434.1
Aspartate aminotransferase.
     
 0.725
aspC
Aspartate aminotransferase.
     
 0.724
Your Current Organism:
uncultured Coprococcus sp.
NCBI taxonomy Id: 458253
Other names: u. Coprococcus sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.