Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCI25306.1 | SCI25336.1 | SAMEA3545228_02177 | SAMEA3545228_02178 | Na+-dependent transporters of the SNF family. | Uncharacterised protein. | 0.608 |
SCI25306.1 | pepD_2 | SAMEA3545228_02177 | SAMEA3545228_02176 | Na+-dependent transporters of the SNF family. | Dipeptidase. | 0.620 |
SCI25306.1 | ribD | SAMEA3545228_02177 | SAMEA3545228_01522 | Na+-dependent transporters of the SNF family. | Riboflavin biosynthesis protein RibD. | 0.602 |
SCI25306.1 | supH | SAMEA3545228_02177 | SAMEA3545228_02175 | Na+-dependent transporters of the SNF family. | Sugar phosphatase SupH. | 0.518 |
SCI25306.1 | udk | SAMEA3545228_02177 | SAMEA3545228_01275 | Na+-dependent transporters of the SNF family. | Uridine kinase. | 0.597 |
SCI25336.1 | SCI25306.1 | SAMEA3545228_02178 | SAMEA3545228_02177 | Uncharacterised protein. | Na+-dependent transporters of the SNF family. | 0.608 |
SCI25336.1 | pepD_2 | SAMEA3545228_02178 | SAMEA3545228_02176 | Uncharacterised protein. | Dipeptidase. | 0.494 |
SCI25336.1 | supH | SAMEA3545228_02178 | SAMEA3545228_02175 | Uncharacterised protein. | Sugar phosphatase SupH. | 0.428 |
pepD_2 | SCI25306.1 | SAMEA3545228_02176 | SAMEA3545228_02177 | Dipeptidase. | Na+-dependent transporters of the SNF family. | 0.620 |
pepD_2 | SCI25336.1 | SAMEA3545228_02176 | SAMEA3545228_02178 | Dipeptidase. | Uncharacterised protein. | 0.494 |
pepD_2 | supH | SAMEA3545228_02176 | SAMEA3545228_02175 | Dipeptidase. | Sugar phosphatase SupH. | 0.643 |
ribD | SCI25306.1 | SAMEA3545228_01522 | SAMEA3545228_02177 | Riboflavin biosynthesis protein RibD. | Na+-dependent transporters of the SNF family. | 0.602 |
ribD | supH | SAMEA3545228_01522 | SAMEA3545228_02175 | Riboflavin biosynthesis protein RibD. | Sugar phosphatase SupH. | 0.783 |
ribD | udk | SAMEA3545228_01522 | SAMEA3545228_01275 | Riboflavin biosynthesis protein RibD. | Uridine kinase. | 0.850 |
supH | SCI25306.1 | SAMEA3545228_02175 | SAMEA3545228_02177 | Sugar phosphatase SupH. | Na+-dependent transporters of the SNF family. | 0.518 |
supH | SCI25336.1 | SAMEA3545228_02175 | SAMEA3545228_02178 | Sugar phosphatase SupH. | Uncharacterised protein. | 0.428 |
supH | pepD_2 | SAMEA3545228_02175 | SAMEA3545228_02176 | Sugar phosphatase SupH. | Dipeptidase. | 0.643 |
supH | ribD | SAMEA3545228_02175 | SAMEA3545228_01522 | Sugar phosphatase SupH. | Riboflavin biosynthesis protein RibD. | 0.783 |
supH | udk | SAMEA3545228_02175 | SAMEA3545228_01275 | Sugar phosphatase SupH. | Uridine kinase. | 0.458 |
udk | SCI25306.1 | SAMEA3545228_01275 | SAMEA3545228_02177 | Uridine kinase. | Na+-dependent transporters of the SNF family. | 0.597 |
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