Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCI25463.1 | ftsH_2 | SAMEA3545228_02182 | SAMEA3545228_02185 | Uncharacterised protein. | ATP-dependent zinc metalloprotease FtsH. | 0.465 |
SCI25463.1 | rsiV | SAMEA3545228_02182 | SAMEA3545228_02184 | Uncharacterised protein. | Anti-sigma-V factor rsiV. | 0.804 |
SCI25463.1 | sigV_2 | SAMEA3545228_02182 | SAMEA3545228_02183 | Uncharacterised protein. | RNA polymerase sigma factor sigV. | 0.700 |
SCI25605.1 | ftsH_2 | SAMEA3545228_02186 | SAMEA3545228_02185 | Uncharacterized conserved protein. | ATP-dependent zinc metalloprotease FtsH. | 0.773 |
SCI25605.1 | rsiV | SAMEA3545228_02186 | SAMEA3545228_02184 | Uncharacterized conserved protein. | Anti-sigma-V factor rsiV. | 0.415 |
SCI25605.1 | sigV_2 | SAMEA3545228_02186 | SAMEA3545228_02183 | Uncharacterized conserved protein. | RNA polymerase sigma factor sigV. | 0.415 |
ftsH_2 | SCI25463.1 | SAMEA3545228_02185 | SAMEA3545228_02182 | ATP-dependent zinc metalloprotease FtsH. | Uncharacterised protein. | 0.465 |
ftsH_2 | SCI25605.1 | SAMEA3545228_02185 | SAMEA3545228_02186 | ATP-dependent zinc metalloprotease FtsH. | Uncharacterized conserved protein. | 0.773 |
ftsH_2 | rsiV | SAMEA3545228_02185 | SAMEA3545228_02184 | ATP-dependent zinc metalloprotease FtsH. | Anti-sigma-V factor rsiV. | 0.415 |
ftsH_2 | sigV_2 | SAMEA3545228_02185 | SAMEA3545228_02183 | ATP-dependent zinc metalloprotease FtsH. | RNA polymerase sigma factor sigV. | 0.420 |
rsiV | SCI25463.1 | SAMEA3545228_02184 | SAMEA3545228_02182 | Anti-sigma-V factor rsiV. | Uncharacterised protein. | 0.804 |
rsiV | SCI25605.1 | SAMEA3545228_02184 | SAMEA3545228_02186 | Anti-sigma-V factor rsiV. | Uncharacterized conserved protein. | 0.415 |
rsiV | ftsH_2 | SAMEA3545228_02184 | SAMEA3545228_02185 | Anti-sigma-V factor rsiV. | ATP-dependent zinc metalloprotease FtsH. | 0.415 |
rsiV | sigV_2 | SAMEA3545228_02184 | SAMEA3545228_02183 | Anti-sigma-V factor rsiV. | RNA polymerase sigma factor sigV. | 0.901 |
sigV_2 | SCI25463.1 | SAMEA3545228_02183 | SAMEA3545228_02182 | RNA polymerase sigma factor sigV. | Uncharacterised protein. | 0.700 |
sigV_2 | SCI25605.1 | SAMEA3545228_02183 | SAMEA3545228_02186 | RNA polymerase sigma factor sigV. | Uncharacterized conserved protein. | 0.415 |
sigV_2 | ftsH_2 | SAMEA3545228_02183 | SAMEA3545228_02185 | RNA polymerase sigma factor sigV. | ATP-dependent zinc metalloprotease FtsH. | 0.420 |
sigV_2 | rsiV | SAMEA3545228_02183 | SAMEA3545228_02184 | RNA polymerase sigma factor sigV. | Anti-sigma-V factor rsiV. | 0.901 |