Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCI10087.1 | SCI26984.1 | SAMEA3545228_01885 | SAMEA3545228_02224 | Nitroreductase A. | Uncharacterised protein. | 0.447 |
SCI26984.1 | SCI10087.1 | SAMEA3545228_02224 | SAMEA3545228_01885 | Uncharacterised protein. | Nitroreductase A. | 0.447 |
SCI26984.1 | frp | SAMEA3545228_02224 | SAMEA3545228_01239 | Uncharacterised protein. | NADPH-flavin oxidoreductase. | 0.447 |
SCI26984.1 | glcB | SAMEA3545228_02224 | SAMEA3545228_00987 | Uncharacterised protein. | PTS system glucoside-specific EIICBA component. | 0.943 |
SCI26984.1 | gltA | SAMEA3545228_02224 | SAMEA3545228_02225 | Uncharacterised protein. | Citrate synthase. | 0.775 |
frp | SCI26984.1 | SAMEA3545228_01239 | SAMEA3545228_02224 | NADPH-flavin oxidoreductase. | Uncharacterised protein. | 0.447 |
glcB | SCI26984.1 | SAMEA3545228_00987 | SAMEA3545228_02224 | PTS system glucoside-specific EIICBA component. | Uncharacterised protein. | 0.943 |
glcB | gltA | SAMEA3545228_00987 | SAMEA3545228_02225 | PTS system glucoside-specific EIICBA component. | Citrate synthase. | 0.446 |
gltA | SCI26984.1 | SAMEA3545228_02225 | SAMEA3545228_02224 | Citrate synthase. | Uncharacterised protein. | 0.775 |
gltA | glcB | SAMEA3545228_02225 | SAMEA3545228_00987 | Citrate synthase. | PTS system glucoside-specific EIICBA component. | 0.446 |