STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kdpD_2Sensor protein KdpD. (897 aa)    
Predicted Functional Partners:
kdpE_2
KDP operon transcriptional regulatory protein KdpE.
 
  0.978
SCG95219.1
Uncharacterized protein conserved in archaea.
  
 0.951
luxQ_1
Autoinducer 2 sensor kinase/phosphatase luxQ.
  
0.907
cph2_1
Bacteriophytochrome cph2.
  
 0.878
kdpE_1
KDP operon transcriptional regulatory protein KdpE.
  
  0.832
walR_1
Transcriptional regulatory protein walR.
  
  0.632
srrA_1
Staphylococcal respiratory response protein A.
   
  0.609
regX3_2
Sensory transduction protein regX3.
   
  0.609
hssR
Heme response regulator hssR.
   
  0.609
phoP_1
Alkaline phosphatase synthesis transcriptional regulatory protein phoP.
   
  0.578
Your Current Organism:
uncultured Coprococcus sp.
NCBI taxonomy Id: 458253
Other names: u. Coprococcus sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.