Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCH63272.1 | SCH63327.1 | SAMEA3545228_01098 | SAMEA3545228_01099 | Bacterial mobilisation protein (MobC). | Relaxase/Mobilisation nuclease domain. | 0.951 |
SCH63272.1 | SCI39507.1 | SAMEA3545228_01098 | SAMEA3545228_02461 | Bacterial mobilisation protein (MobC). | Recombinase. | 0.669 |
SCH63272.1 | SCI39576.1 | SAMEA3545228_01098 | SAMEA3545228_02463 | Bacterial mobilisation protein (MobC). | Uncharacterised protein. | 0.775 |
SCH63272.1 | SCI39643.1 | SAMEA3545228_01098 | SAMEA3545228_02465 | Bacterial mobilisation protein (MobC). | Phage replisome organizer%2C putative%2C N-terminal region. | 0.683 |
SCH63272.1 | SCI39676.1 | SAMEA3545228_01098 | SAMEA3545228_02466 | Bacterial mobilisation protein (MobC). | Relaxase/Mobilisation nuclease domain. | 0.783 |
SCH63272.1 | dnaI | SAMEA3545228_01098 | SAMEA3545228_02464 | Bacterial mobilisation protein (MobC). | Primosomal protein DnaI. | 0.756 |
SCH63327.1 | SCH63272.1 | SAMEA3545228_01099 | SAMEA3545228_01098 | Relaxase/Mobilisation nuclease domain. | Bacterial mobilisation protein (MobC). | 0.951 |
SCH63327.1 | SCI39507.1 | SAMEA3545228_01099 | SAMEA3545228_02461 | Relaxase/Mobilisation nuclease domain. | Recombinase. | 0.740 |
SCH63327.1 | SCI39576.1 | SAMEA3545228_01099 | SAMEA3545228_02463 | Relaxase/Mobilisation nuclease domain. | Uncharacterised protein. | 0.783 |
SCH63327.1 | SCI39643.1 | SAMEA3545228_01099 | SAMEA3545228_02465 | Relaxase/Mobilisation nuclease domain. | Phage replisome organizer%2C putative%2C N-terminal region. | 0.746 |
SCH63327.1 | dnaI | SAMEA3545228_01099 | SAMEA3545228_02464 | Relaxase/Mobilisation nuclease domain. | Primosomal protein DnaI. | 0.783 |
SCI23442.1 | SCI39576.1 | SAMEA3545228_02123 | SAMEA3545228_02463 | Plasmid recombination enzyme. | Uncharacterised protein. | 0.471 |
SCI23442.1 | SCI39676.1 | SAMEA3545228_02123 | SAMEA3545228_02466 | Plasmid recombination enzyme. | Relaxase/Mobilisation nuclease domain. | 0.425 |
SCI23442.1 | dnaI | SAMEA3545228_02123 | SAMEA3545228_02464 | Plasmid recombination enzyme. | Primosomal protein DnaI. | 0.456 |
SCI39507.1 | SCH63272.1 | SAMEA3545228_02461 | SAMEA3545228_01098 | Recombinase. | Bacterial mobilisation protein (MobC). | 0.669 |
SCI39507.1 | SCH63327.1 | SAMEA3545228_02461 | SAMEA3545228_01099 | Recombinase. | Relaxase/Mobilisation nuclease domain. | 0.740 |
SCI39507.1 | SCI39576.1 | SAMEA3545228_02461 | SAMEA3545228_02463 | Recombinase. | Uncharacterised protein. | 0.771 |
SCI39507.1 | SCI39643.1 | SAMEA3545228_02461 | SAMEA3545228_02465 | Recombinase. | Phage replisome organizer%2C putative%2C N-terminal region. | 0.770 |
SCI39507.1 | SCI39676.1 | SAMEA3545228_02461 | SAMEA3545228_02466 | Recombinase. | Relaxase/Mobilisation nuclease domain. | 0.772 |
SCI39507.1 | dnaI | SAMEA3545228_02461 | SAMEA3545228_02464 | Recombinase. | Primosomal protein DnaI. | 0.774 |
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