STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rplLMA1/MA2. (121 aa)    
Predicted Functional Partners:
rplI
BL17.
  
 0.999
rpmA
50S ribosomal protein L27.
 
 
 0.999
rplO
50S ribosomal protein L15.
 
 0.999
rplK
50S ribosomal protein L11.
 
 
 0.999
rplA
50S ribosomal protein L1.
 
 
 0.999
rplJ
50S ribosomal protein L10.
 
 
 0.999
SCH33859.1
Uncharacterised protein.
  
 0.998
rplU
50S ribosomal protein L21.
   
 
 0.998
rpmF
50S ribosomal protein L32.
  
 
 0.998
rplS
50S ribosomal protein L19.
   
 
 0.998
Your Current Organism:
uncultured Coprococcus sp.
NCBI taxonomy Id: 458253
Other names: u. Coprococcus sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.