STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OKZ35944.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (211 aa)    
Predicted Functional Partners:
OKZ35943.1
ATPase P; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
OKZ35942.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.714
OKZ35940.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.676
OKZ35941.1
Thioredoxin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.676
OKZ38164.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.651
OKZ36210.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.608
OKZ35945.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.556
OKZ35939.1
MATE family efflux transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.480
OKZ36353.1
SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.462
fabH
Hypothetical protein; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.
 
     0.459
Your Current Organism:
Butyrivibrio crossotus
NCBI taxonomy Id: 45851
Other names: ATCC 29175, B. crossotus, DSM 2876, VPI T9-40A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.