STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OKZ36120.1Hypothetical protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. (178 aa)    
Predicted Functional Partners:
fliN
Flagellar motor switch phosphatase FliY; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.801
OKZ36118.1
Motility protein A; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.763
OKZ36119.1
Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.760
OKZ36124.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.693
fliM
Flagellar motor switch protein FliM; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.669
OKZ36117.1
Flagellar protein FlbD; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.563
fliP
Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
       0.519
fliQ
Flagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.
       0.488
OKZ36139.1
RNA polymerase subunit sigma; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
     
 0.488
OKZ36123.1
Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.480
Your Current Organism:
Butyrivibrio crossotus
NCBI taxonomy Id: 45851
Other names: ATCC 29175, B. crossotus, DSM 2876, VPI T9-40A
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