STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
T03_18133Uncharacterized protein. (44 aa)    
Predicted Functional Partners:
TONSL
Tonsoku-like protein.
    
 0.775
lrk-1
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.765
unc-89
Muscle M-line assembly protein unc-89.
    
 0.755
unc-89-2
Muscle M-line assembly protein unc-89.
    
 0.755
KDM6A
Lysine-specific demethylase 6A.
    
 0.699
T03_13936
Uncharacterized protein.
    
 0.689
Mrps11
28S ribosomal protein S11, mitochondrial.
    
  0.688
GTF3C3
General transcription factor 3C polypeptide 3.
    
 0.687
MRPS2
28S ribosomal protein S2, mitochondrial.
    
  0.686
mRpS6
Putative 28S ribosomal protein S6, mitochondrial.
    
  0.682
Your Current Organism:
Trichinella britovi
NCBI taxonomy Id: 45882
Other names: T. britovi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.