STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T03_8849Uncharacterized protein. (56 aa)    
Predicted Functional Partners:
lrk-1
Leucine-rich repeat serine/threonine-protein kinase 1.
   
 0.830
TONSL
Tonsoku-like protein.
    
 0.824
Gak
Cyclin-G-associated kinase.
   
 0.773
Rab11a
Ras-related protein Rab-11A.
   
 0.771
Plk1
Serine/threonine-protein kinase PLK.
   
 0.756
CETN1
Centrin-1.
    
 0.744
ift20
Intraflagellar transport protein 20-like protein.
   
 0.732
ACBD3
Golgi resident protein GCP60.
    
 0.719
DYH1B
Cytoplasmic dynein 2 heavy chain 1.
   
 0.715
Dhc64C
Alpha-galactosidase.
   
 0.715
Your Current Organism:
Trichinella britovi
NCBI taxonomy Id: 45882
Other names: T. britovi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.