STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T03_16660Uncharacterized protein. (125 aa)    
Predicted Functional Partners:
FANCM
Fanconi anemia group M protein.
    
  0.788
T03_17200
Uncharacterized protein.
  
     0.513
T03_15516
Uncharacterized protein.
  
     0.487
T03_11727
Uncharacterized protein.
  
     0.485
T03_10834
Uncharacterized protein.
  
     0.483
T03_10243
Uncharacterized protein.
  
     0.479
T03_706
Uncharacterized protein.
  
     0.476
T03_7976
Uncharacterized protein.
  
     0.475
T03_16199
Uncharacterized protein.
  
     0.464
lin-54
Protein lin-54.
    
  0.455
Your Current Organism:
Trichinella britovi
NCBI taxonomy Id: 45882
Other names: T. britovi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.