STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pol-64Retrovirus-related Pol polyprotein from transposon opus. (926 aa)    
Predicted Functional Partners:
FANCM
Fanconi anemia group M protein.
    
  0.788
lin-54
Protein lin-54.
    
 0.670
Tf2-9-5
Transposon Tf2-9 polyprotein.
  
  
 
0.478
pol-71
Retrovirus-related Pol polyprotein from transposon 17.6.
  
  
 
0.474
pol-80
Retrovirus-related Pol polyprotein from transposon 17.6.
  
  
 
0.455
lin-9
Protein lin-9.
    
  0.453
pol-59
Retrovirus-related Pol polyprotein from transposon 17.6.
  
  
 
0.443
pol-60
Retrovirus-related Pol polyprotein from transposon.
  
  
 
0.443
pol-65
Retrovirus-related Pol polyprotein from transposon 17.6.
  
  
 
0.441
TY3B-G-12
Transposon Ty3-G Gag-Pol polyprotein.
  
  
 
0.439
Your Current Organism:
Trichinella britovi
NCBI taxonomy Id: 45882
Other names: T. britovi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.