STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
smo-1Small ubiquitin-related modifier. (91 aa)    
Predicted Functional Partners:
SAE1
SUMO-activating enzyme subunit 1.
   
 0.974
PCNA
Proliferating cell nuclear antigen.
   
 0.968
T03_3529
Uncharacterized protein.
   
 0.965
Rangap1
Ran GTPase-activating protein 1.
    
 0.954
ulp-1
Sentrin-specific protease.
    
 0.930
SENP1
Sentrin-specific protease 1.
    
 0.930
ube2ia
SUMO-conjugating enzyme UBC9-A; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.915
ube2ia-3
SUMO-conjugating enzyme UBC9-A.
   
 0.915
ube2ia-4
SUMO-conjugating enzyme UBC9-A; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.915
Pias3
E3 SUMO-protein ligase PIAS3.
    
 0.910
Your Current Organism:
Trichinella britovi
NCBI taxonomy Id: 45882
Other names: T. britovi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.