STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC27A1Long-chain fatty acid transport protein 1. (649 aa)    
Predicted Functional Partners:
BBS1
Bardet-Biedl syndrome 1 protein.
   
 0.955
BBS9
Protein PTHB1.
   
 0.951
BBS7
Bardet-Biedl syndrome 7 protein.
    
 0.950
hsdl2
Hydroxysteroid dehydrogenase-like protein 2.
    
 0.878
T03_963
Uncharacterized protein.
    
 0.864
KDM6A
Lysine-specific demethylase 6A.
    
 0.864
Tmtc2
Transmembrane and TPR repeat-containing protein 2.
    
 0.864
Tmtc4
Transmembrane and TPR repeat-containing protein 4.
    
 0.864
VWA9
Von Willebrand factor A domain-containing protein 9.
    
 0.864
KLHL3
Kelch-like protein 3.
    
 0.831
Your Current Organism:
Trichinella britovi
NCBI taxonomy Id: 45882
Other names: T. britovi
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.