LIG4 protein (Trichinella britovi) - STRING interaction network

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Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

LIG4

DNA ligase. (2563 aa)

Predicted Functional Partners:

Xrcc5

0.990

PCNA

0.988

XRCC1

0.952

ERCC5

0.946

POLL

0.928

Pnkp

0.906

T03_6160

0.899

CNPPD1

0.899

T03_17700

0.899

MRE11A

0.899

Your Current Organism:

Trichinella britovi

NCBI taxonomy Id: 45882
Other names: T. britovi

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CNPPD1	LIG4	A0A0V1CG20	A0A0V1CQ95	Protein CNPPD1.	DNA ligase.	0.899
CNPPD1	POLL	A0A0V1CG20	A0A0V1D263	Protein CNPPD1.	DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity.	0.749
CNPPD1	Xrcc5	A0A0V1CG20	A0A0V1D0M1	Protein CNPPD1.	X-ray repair cross-complementing protein 5.	0.903
ERCC5	LIG4	A0A0V1DDL6	A0A0V1CQ95	DNA repair protein.	DNA ligase.	0.946
ERCC5	MRE11A	A0A0V1DDL6	A0A0V1D5S2	DNA repair protein.	Tyrosine 3-monooxygenase.	0.990
ERCC5	PCNA	A0A0V1DDL6	A0A0V1CY53	DNA repair protein.	Proliferating cell nuclear antigen.	0.997
ERCC5	POLL	A0A0V1DDL6	A0A0V1D263	DNA repair protein.	DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity.	0.910
ERCC5	Pnkp	A0A0V1DDL6	A0A0V1CPY2	DNA repair protein.	Bifunctional polynucleotide phosphatase/kinase.	0.495
ERCC5	XRCC1	A0A0V1DDL6	A0A0V1CCH2	DNA repair protein.	DNA repair protein XRCC1.	0.859
ERCC5	Xrcc5	A0A0V1DDL6	A0A0V1D0M1	DNA repair protein.	X-ray repair cross-complementing protein 5.	0.783
LIG4	CNPPD1	A0A0V1CQ95	A0A0V1CG20	DNA ligase.	Protein CNPPD1.	0.899
LIG4	ERCC5	A0A0V1CQ95	A0A0V1DDL6	DNA ligase.	DNA repair protein.	0.946
LIG4	MRE11A	A0A0V1CQ95	A0A0V1D5S2	DNA ligase.	Tyrosine 3-monooxygenase.	0.899
LIG4	PCNA	A0A0V1CQ95	A0A0V1CY53	DNA ligase.	Proliferating cell nuclear antigen.	0.988
LIG4	POLL	A0A0V1CQ95	A0A0V1D263	DNA ligase.	DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity.	0.928
LIG4	Pnkp	A0A0V1CQ95	A0A0V1CPY2	DNA ligase.	Bifunctional polynucleotide phosphatase/kinase.	0.906
LIG4	T03_17700	A0A0V1CQ95	A0A0V1CPA8	DNA ligase.	Uncharacterized protein.	0.899
LIG4	T03_6160	A0A0V1CQ95	A0A0V1C960	DNA ligase.	Uncharacterized protein.	0.899
LIG4	XRCC1	A0A0V1CQ95	A0A0V1CCH2	DNA ligase.	DNA repair protein XRCC1.	0.952
LIG4	Xrcc5	A0A0V1CQ95	A0A0V1D0M1	DNA ligase.	X-ray repair cross-complementing protein 5.	0.990