Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SPINK4Serine protease inhibitor Kazal-type 4. (150 aa)    
Predicted Functional Partners:
bmp4
Bone morphogenetic protein 4.
    
 0.830
bmp3
Bone morphogenetic protein 3.
    
 0.830
BMP5
Bone morphogenetic protein 5.
    
 0.830
MSTN
Growth/differentiation factor 8.
    
 0.830
Actbeta
Inhibin beta chain.
    
 0.830
etaTry
Trypsin eta.
    
  0.593
KLKB1
Plasma kallikrein.
    
  0.593
PLG
Plasminogen-like protein; Belongs to the peptidase S1 family.
    
  0.593
CELA3B
Chymotrypsin-like elastase family member 3B.
    
  0.593
PLG-2
Plasminogen-like protein; Belongs to the peptidase S1 family.
    
  0.593
Your Current Organism:
Trichinella britovi
NCBI taxonomy Id: 45882
Other names: T. britovi
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