STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ube2g1Ubiquitin-conjugating enzyme E2 G1; Belongs to the ubiquitin-conjugating enzyme family. (174 aa)    
Predicted Functional Partners:
UBA1
Ubiquitin-like modifier-activating enzyme 1; Belongs to the ubiquitin-activating E1 family.
   
 0.998
rbx1
RING-box protein 1.
   
 0.988
UBB-2
Polyubiquitin-B.
   
 0.974
UBA52
Ubiquitin-60S ribosomal protein L40.
   
 0.974
Ubc
Polyubiquitin-C.
   
 0.967
UBC
Polyubiquitin-C.
   
 0.966
TRIP12
E3 ubiquitin-protein ligase TRIP12.
    
 0.965
Cul1
Cullin-1; Belongs to the cullin family.
   
 0.940
Cul3
Cullin-3; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
 0.939
UBE2V1
Ubiquitin-conjugating enzyme E2 variant 1.
    
 0.933
Your Current Organism:
Trichinella britovi
NCBI taxonomy Id: 45882
Other names: T. britovi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.