STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sh3betaSH3 domain-binding glutamic acid-rich-like protein. (298 aa)    
Predicted Functional Partners:
RAB27A
Ras-related protein Rab-27A.
    
 
 0.665
NIPA2
Magnesium transporter NIPA2.
      
 0.656
PANK2
Pantothenate kinase 2, mitochondrial.
      
 0.655
Egfr
Receptor protein-tyrosine kinase.
    
   0.628
TBCK
TBC domain-containing protein kinase-like protein.
      
 0.595
ttx-7
Inositol-1-monophosphatase.
    
 
 0.546
TXNDC11
Thioredoxin domain-containing protein 11.
      
 0.508
MRE11A
Tyrosine 3-monooxygenase.
      
 0.502
GHITM
Growth hormone-inducible transmembrane protein.
      
 0.478
PDXK
Pyridoxal kinase.
      
 0.470
Your Current Organism:
Trichinella britovi
NCBI taxonomy Id: 45882
Other names: T. britovi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.