STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fez2Fasciculation and elongation protein zeta-2. (409 aa)    
Predicted Functional Partners:
T03_1681
Short coiled-coil-like protein.
   
 
 0.966
T03_4689
Kinesin heavy chain; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 
 0.942
unc-51
Serine/threonine-protein kinase unc-51.
    
 
 0.785
ULK3-2
Serine/threonine-protein kinase ULK3.
    
 
 0.737
jac-1
Juxtamembrane domain-associated catenin.
      
 0.735
crim1
Cysteine-rich motor neuron 1 protein.
      
 0.661
gulp1
PTB domain-containing engulfment adapter protein 1.
      
 0.657
T03_387
Kinesin light chain.
    
 
 0.657
IMPDH1
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth.
    
   0.614
leng8
Leukocyte receptor cluster member 8-like protein.
      
 0.607
Your Current Organism:
Trichinella britovi
NCBI taxonomy Id: 45882
Other names: T. britovi
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