Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
T03_10104Uncharacterized protein. (757 aa)    
Predicted Functional Partners:
unc-89
Muscle M-line assembly protein unc-89.
    
 0.930
unc-89-2
Muscle M-line assembly protein unc-89.
    
 0.930
lrk-1
Leucine-rich repeat serine/threonine-protein kinase 1.
   
 0.896
Pes1
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 0.858
Wdr18
Pre-rRNA-processing protein pro-1.
   
 0.857
trio
Triple functional domain protein.
    
 0.852
TEX10
Testis-expressed sequence 10-like protein.
    
 0.850
dlc
Delta-like protein C.
    
 0.829
SVEP1
Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1.
    
 0.829
oxt
Xylosyltransferase oxt.
    
 0.817
Your Current Organism:
Trichinella britovi
NCBI taxonomy Id: 45882
Other names: T. britovi
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