STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tyr-3Putative tyrosinase-like protein tyr-3. (832 aa)    
Predicted Functional Partners:
DDX46
Putative ATP-dependent RNA helicase DDX46.
   
 0.976
prpf38a
Pre-mRNA-splicing factor 38A.
   
 0.974
Bx42
Puff-specific protein Bx42.
    
 0.956
Rbm22
Pre-mRNA-splicing factor RBM22.
   
 0.955
CDC5L
Cell division cycle 5-like protein.
   
  0.954
cwc15-a
Protein CWC15-like protein A.
   
  0.951
Prpf19
Pre-mRNA-processing factor 19.
    
 0.947
CRNKL1
Crooked neck-like protein 1.
    
  0.945
Ccdc12
Coiled-coil domain-containing protein 12.
    
  0.945
SRRM1
Serine/arginine repetitive matrix protein 1.
   
 0.935
Your Current Organism:
Trichinella britovi
NCBI taxonomy Id: 45882
Other names: T. britovi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.