STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TGThyroglobulin. (1124 aa)    
Predicted Functional Partners:
nrxn1a
Neurexin-1a.
    
 0.870
CASK
Peripheral plasma membrane protein CASK.
   
 0.829
UTP20
Small subunit processome component 20-like protein.
   
 0.825
RPS6
40S ribosomal protein S6.
   
 0.791
Krr1
KRR1 small subunit processome component-like protein.
    
  0.786
Emg1
Ribosomal RNA small subunit methyltransferase NEP1.
    
  0.786
T03_11157
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
    
  0.786
DCAF13
DDB1-and CUL4-associated factor 13.
    
  0.786
FCF1
rRNA-processing protein FCF1-like protein.
    
  0.786
Sas10
Something about silencing protein 10.
    
  0.783
Your Current Organism:
Trichinella britovi
NCBI taxonomy Id: 45882
Other names: T. britovi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.