STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HNRNPFHeterogeneous nuclear ribonucleoprotein F. (482 aa)    
Predicted Functional Partners:
hrp-1
Heterogeneous nuclear ribonucleoprotein A1.
   
 0.923
Myef2
Myelin expression factor 2.
   
 0.900
A1CF
APOBEC1 complementation factor.
   
 0.878
RSPRY1
RING finger and SPRY domain-containing protein 1.
   
 0.876
Srsf4
Serine/arginine-rich splicing factor 4.
   
 0.875
SRSF1
Serine/arginine-rich splicing factor 1.
   
 0.870
Srsf3
Serine/arginine-rich splicing factor 3.
   
 0.867
Srsf3-2
Serine/arginine-rich splicing factor 3.
   
 0.867
rsp-7
Putative splicing factor, arginine/serine-rich 7.
   
 0.859
Ptbp3
Polypyrimidine tract-binding protein 3.
   
 0.853
Your Current Organism:
Trichinella britovi
NCBI taxonomy Id: 45882
Other names: T. britovi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.