STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T03_6642Uncharacterized protein. (942 aa)    
Predicted Functional Partners:
SMC5
Structural maintenance of chromosomes protein 5.
    
 0.900
T03_16105
Uncharacterized protein.
    
 0.883
smc6
Structural maintenance of chromosomes protein 6.
    
 0.883
gly-10
Structural maintenance of chromosomes protein.
    
 0.818
smc3
Structural maintenance of chromosomes protein 3.
    
 0.806
Smc3
Structural maintenance of chromosomes protein; Belongs to the complex I 49 kDa subunit family.
    
 0.806
Smc2
Structural maintenance of chromosomes protein.
    
 0.782
smc4
Structural maintenance of chromosomes protein.
    
 0.782
Npas4
Neuronal PAS domain-containing protein 4.
    
 0.766
REC8
Meiotic recombination protein REC8-like protein.
    
 0.720
Your Current Organism:
Trichinella britovi
NCBI taxonomy Id: 45882
Other names: T. britovi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.