STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tsc1-2Hamartin. (1073 aa)    
Predicted Functional Partners:
Rheb
GTP-binding protein Rheb.
   
 0.985
Tsc2
Tuberin.
   
 0.981
STIP1
Stress-induced-phosphoprotein 1.
  
 0.979
KDM6A
Lysine-specific demethylase 6A.
  
 0.957
PPP5C
Serine/threonine-protein phosphatase 5.
    
 0.955
lrk-1
Leucine-rich repeat serine/threonine-protein kinase 1.
   
 0.952
PPID
Peptidyl-prolyl cis-trans isomerase D.
  
 0.951
HSPA8
Heat shock cognate 71 kDa protein; Belongs to the heat shock protein 70 family.
  
 0.951
CYP-1
Peptidyl-prolyl cis-trans isomerase 1.
  
 0.951
HSPA8-2
Heat shock cognate 71 kDa protein.
  
 0.951
Your Current Organism:
Trichinella britovi
NCBI taxonomy Id: 45882
Other names: T. britovi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.