STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLOAM0052Hypothetical protein; No homology to any previously reported sequences. (244 aa)    
Predicted Functional Partners:
nadD
Putative nicotinate (nicotinamide) nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
 
     0.813
CLOAM0132
Hypothetical protein; No homology to any previously reported sequences.
 
 
 0.733
CLOAM0050
Putative M18-family aminopeptidase 1 (apeA); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.732
CLOAM0051
Hypothetical protein; No homology to any previously reported sequences.
       0.732
CLOAM1176
Putative increased membrane permeability protein or organic solvent tolerance protein (imp-like); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier.
 
  
 0.701
greA
Putative transcription elongation factor; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.
  
    0.700
CLOAM1419
Hypothetical protein; No homology to any previously reported sequences.
   
 
 0.696
CLOAM0048
Hypothetical protein; No homology to any previously reported sequences.
       0.693
CLOAM1493
Hypothetical protein; No homology to any previously reported sequences.
 
 
 0.635
CLOAM0114
Hypothetical protein; No homology to any previously reported sequences.
 
 
 0.602
Your Current Organism:
Cloacimonas acidaminovorans
NCBI taxonomy Id: 459349
Other names: C. Cloacimonas acidaminovorans str. Evry, Candidatus Cloacamonas acidaminovorans str. Evry, Candidatus Cloacimonas acidaminovorans str. Evry
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.