Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CLOAM0085ABC transporter, ATP-binding protein. (250 aa)    
Predicted Functional Partners:
CLOAM0084
ABC-type transport systems, involved in lipoprotein release, permease components.
 
 0.997
CLOAM1734
Putative ABC-type transport systems, involved in lipoprotein release, permease components.
 
 0.989
CLOAM1897
Putative ABC-type transport systems, involved in lipoprotein release, permease components.
 
 0.989
CLOAM0086
Putative efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.956
ccmA1
ABC-type multidrug transport system, ATPase component.
  
0.912
mdlB
ABC-type multidrug/protein/lipid transport system, ATPase component.
    
0.858
CLOAM1019
Putative ABC transporter, transmembrane region:ABC transporter related.
    
0.839
CLOAM1521
ABC transporter, transmembrane region:ABC transporter related.
 
  
0.819
CLOAM0620
Hypothetical protein; No homology to any previously reported sequences; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.808
CLOAM0143
Hypothetical protein; No homology to any previously reported sequences.
  
 
 0.738
Your Current Organism:
Cloacimonas acidaminovorans
NCBI taxonomy Id: 459349
Other names: C. Cloacimonas acidaminovorans str. Evry, Candidatus Cloacamonas acidaminovorans str. Evry, Candidatus Cloacimonas acidaminovorans str. Evry
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